PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010939521.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family TCP
Protein Properties Length: 380aa    MW: 39478.4 Da    PI: 8.1707
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010939521.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP128.19e-4064220289
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg....... 88 
                     ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++  + s +ss+s+ s +       
  XP_010939521.1  64 PPKRSSTKDRHTKVEGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSSISVPsrlhany 158
                     789******************************************************************99976777777766333335556666 PP

             TCP  89 .............................................................k 89 
                                                                                  +
  XP_010939521.1 159 fssatgltppplriggsgfppegpsssssslllnfnsgscigadtpsdadiggnmrkrrweQ 220
                     66666666777666666666666655555555555555555555555555555555555541 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036345.1E-4069234IPR005333Transcription factor, TCP
PROSITE profilePS5136927.86970124IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 380 aa     Download sequence    Send to blast
MEGDATGGSR RPNFPLQLLE KKEEDSCSSS GYPSLAISSD PSTAAGGSGS GGHELATDPL  60
RKAPPKRSST KDRHTKVEGR GRRIRMPALC AARVFQLTRE LGHKSDGETI EWLLQQAEPA  120
VIAATGTGTI PANFTSLNIS LRSSGSSISV PSRLHANYFS SATGLTPPPL RIGGSGFPPE  180
GPSSSSSSLL LNFNSGSCIG ADTPSDADIG GNMRKRRWEQ ELQQHHHHLP QQQQQQPLQH  240
QMASYSQASH GQIPGTLWMV TNPNSQSXAS GESIWTFPQM GSTTMFRGSM SSGLHFMNIP  300
TPMALLPGQQ LGLGSGSGGG GGGGGGGGGG GGSGEGHMGI LAALNAYRLP PSASDQVQTR  360
SQQAHGGGDG RHDTMSTSES
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1316332SGGGGGGGGGGGGGGGS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010939521.10.0PREDICTED: LOW QUALITY PROTEIN: transcription factor TCP15-like
SwissprotQ93Z008e-51TCP14_ARATH; Transcription factor TCP14
TrEMBLM0TII61e-114M0TII6_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr7P17990_0011e-113(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37443479
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69690.16e-48TCP family protein